Network motifs essay

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Network motifs essay in 2021

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The social network themes

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How is network prophetic

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The social network essay questions

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Network movie analysis

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Network movie themes

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Motif essay examples

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Motif paragraph

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What are the features of the motif package?

Motifs are small configurations of nodes and edges (subgraphs) within an overall network. Package features include: Visualization: The package provides functions to visualize multi-level networks, based on ggraph.

Which is an example of a three node motif?

Let’s quickly check out two classic examples of three-node, two-level motifs (open and closed triangles) in the wetlands management network introduced above: Let’s count the number of of these motifs in the entire network. An exploratory approach can be taken by calling motif_summary ().

How to count motif in a multi-level network?

Motif counts: The package is in many parts a R wrapper for the excellent SESMotifAnalyser Python framework written by Tim Seppelt to count multi-level network motifs, compare them to a baseline and much more. Only parts of of SESMotifAnalyser are yet wrapped, so consult the python framework for additional functionality.

How to explore a motif in a network?

For example, if your network is stored in a object named my_net with a level attribute lvl you can explore motifs within it interactively using explore_motifs (net = my_net, lvl_attr = "lvl"). Be aware that if your network does not contain a specific motif, it cannot be displayed.

Last Update: Oct 2021


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